Variant Gene Risk Allele Score vda Association Type Original DB Sentence supporting the association PMID PMID Year
dbSNP: rs34757931
rs34757931
G 0.700 CausalMutation CLINVAR

dbSNP: rs1800629
rs1800629
TNF
0.010 GeneticVariation BEFREE Expression of these cytokines can be modulated by polymorphisms such as rs16944 and rs1800629, respectively, both of which have been associated with febrile seizures (FS) and MTLE-HS development. 28675059

2018

dbSNP: rs431905504
rs431905504
T 0.700 CausalMutation CLINVAR Genetic mapping and exome sequencing identify variants associated with five novel diseases. 22279524

2012

dbSNP: rs146572471
rs146572471
0.010 GeneticVariation BEFREE Here we sequenced SLC30A3 and discovered a rare variant (c.892C > T; p.R298C) enriched in FS populations but absent in population-matched controls. 26647834

2015

dbSNP: rs142740233
rs142740233
0.010 GeneticVariation BEFREE Our data suggest that KCC2-R952H is a bona fide susceptibility variant for febrile seizures. 24668262

2014

dbSNP: rs6746030
rs6746030
0.010 GeneticVariation BEFREE Here, we performed a genetic screen of patients with febrile seizures and identified a novel missense mutation of SCN9A (W1150R). 31372899

2020

dbSNP: rs763256222
rs763256222
0.010 GeneticVariation BEFREE Three novelSCN9A heterozygous missense mutations (I775M, R429C and A442T) were noted, which are associated with febrile seizures (FS), febrile seizures plus (FS<sup>+</sup>) and genetic epilepsy with febrile seizures plus (GEFS<sup>+</sup>), respectively. 31394368

2019

dbSNP: rs770771659
rs770771659
0.010 GeneticVariation BEFREE Three novelSCN9A heterozygous missense mutations (I775M, R429C and A442T) were noted, which are associated with febrile seizures (FS), febrile seizures plus (FS<sup>+</sup>) and genetic epilepsy with febrile seizures plus (GEFS<sup>+</sup>), respectively. 31394368

2019

dbSNP: rs1555228665
rs1555228665
C 0.700 GeneticVariation CLINVAR

dbSNP: rs3769955
rs3769955
T 0.700 GeneticVariation GWASCAT Furthermore, four loci were associated with febrile seizures in general, implicating the sodium channel genes SCN1A (rs6432860: P = 2.2 × 10(-16)) and SCN2A (rs3769955: P = 3.1 × 10(-10)), a TMEM16 family gene (ANO3; rs114444506: P = 3.7 × 10(-20)) and a region associated with magnesium levels (12q21.33; rs11105468: P = 3.4 × 10(-11)). 25344690

2014

dbSNP: rs121917748
rs121917748
0.010 GeneticVariation BEFREE We attempted to identify the R188W mutation and confirm association of the R19K polymorphism in 93 Japanese patients with FS, 35 Japanese patients with FS associated with afebrile seizures including GEFS+, and 100 control subjects.The R188W mutation was not found. 12165424

2002

dbSNP: rs16850331
rs16850331
0.010 GeneticVariation BEFREE Two SCN2A SNPs (rs3943809 and rs16850331) were associated by case-control with a subgroup with IGE and history of febrile seizures and also by transmission disequilibrium test (TDT) in parent-proband trios. 20041941

2010

dbSNP: rs17183814
rs17183814
0.010 GeneticVariation BEFREE We attempted to identify the R188W mutation and confirm association of the R19K polymorphism in 93 Japanese patients with FS, 35 Japanese patients with FS associated with afebrile seizures including GEFS+, and 100 control subjects.The R188W mutation was not found. 12165424

2002

dbSNP: rs3943809
rs3943809
0.010 GeneticVariation BEFREE Two SCN2A SNPs (rs3943809</span> and rs16850331) were associated by case-control with a subgroup with IGE and history of febrile seizures and also by transmission disequilibrium test (TDT) in parent-proband trios. 20041941

2010

dbSNP: rs1559193213
rs1559193213
TG 0.700 CausalMutation CLINVAR

dbSNP: rs886039529
rs886039529
C 0.700 CausalMutation CLINVAR

dbSNP: rs556893466
rs556893466
0.010 GeneticVariation BEFREE One of the mosaic carriers with ~25.0% mutation of c.5768A>G/p.Q1923R had experienced simple FS; another with ~12.5% mutation of c.4847T>C/p.I1616T was asymptomatic.Their heterozygous children had PEFS+. 22151702

2012

dbSNP: rs1553553485
rs1553553485
C 0.700 CausalMutation CLINVAR

dbSNP: rs6432860
rs6432860
G 0.700 GeneticVariation GWASCAT Furthermore, four loci were associated with febrile seizures in general, implicating the sodium channel genes SCN1A (rs6432860: P = 2.2 × 10(-16)) and SCN2A (rs3769955: P = 3.1 × 10(-10)), a TMEM16 family gene (ANO3; rs114444506: P = 3.7 × 10(-20)) and a region associated with magnesium levels (12q21.33; rs11105468: P = 3.4 × 10(-11)). 25344690

2014

dbSNP: rs3812718
rs3812718
0.030 GeneticVariation BEFREE Arecent study in Caucasians found an association between the single nucleotide polymorphism (SNP) of SCN1A, IVS5N +5 G>A (rs3812718), and febrile seizures (FS). 20477842

2010

dbSNP: rs3812718
rs3812718
0.030 GeneticVariation BEFREE We conclude that in the population studied, although rs3812718 polymorphism increases the susceptibility to MTLE-HS, this is not by increasing the susceptibility to FS. 22578703

2012

dbSNP: rs3812718
rs3812718
0.030 GeneticVariation BEFREE SCN1A rs3812718 polymorphism and susceptibility to epilepsy with febrile seizures: a meta-analysis. 24076350

2014

dbSNP: rs121918631
rs121918631
0.010 GeneticVariation BEFREE Here we show that the M145T mutation of a well conserved amino acid in the first transmembrane segment of domain I of the human Na(v)1.1 channel alpha-subunit cosegregates in all 12 individuals of a large Italian family affected by simple FS. 16326807

2005

dbSNP: rs121918782
rs121918782
0.010 GeneticVariation BEFREE We identified two possibly pathogenic missense variants (p.Tyr790Phe and p.Thr140Ile) in sporadic patients (3.8%) showing typical EAF and no antecedent febrile seizures. 30977726

2019

dbSNP: rs7587026
rs7587026
0.010 GeneticVariation BEFREE Meta-analysis revealed a genome-wide significant association for mesial temporal lobe epilepsy with hippocampal sclerosis with febrile seizures at the sodium channel gene cluster on chromosome 2q24.3 [rs7587</span>026, within an intron of the SCN1A gene, P = 3.36 × 10(-9), odds ratio (A) = 1.42, 95% confidence interval: 1.26-1.59]. 24014518

2013